Home|Journals|Articles by Year Follow on Twitter

Directory for Medical Articles
 

Open Access

Original Article



In silico analysis of chili encoded miRNAs targeting Chili leaf curl begomovirus and its associated satellite

Megha Mishra, Rajesh Kumar, Rajarshi Kumar Gaur, Rakesh Kumar Verma.

Abstract
Chilli leaf curl virus (ChiLCV), a member of Geminiviridae family (Genus: Begomovirus), is one of the most destructive plant virus. Micro (mi) RNAs, are the endogenous non-coding small RNAs that play significant roles in plant growth and stress resistance by degrading targeted mRNA or repressing mRNA translation. Computational methods have identified numerous miRNAs in many plant species, whereas there is no report of chilli miRNAs targeting essential genes of ChiLCV genome and associated satellites. In this study, we have predicted chilli encoded miRNAs that could be used for silencing against chilli leaf curl virus (Accession no. MF737343) infection. We predicted several potential mir miRNAs, exhibited high complementarities with V1 (CP) and C1 (Rep) genes of ChiLCV. Other overlapping genes V2, C2 and C3 were also targeted by mir-miRNAs.

Key words: RNA interference, chilli leaf curl virus, cleavage, micro RNAs



Similar Articles

Promoter CAG is more efficient than hepatocyte‑targeting TBG for transgene expression via rAAV8 in liver tissues.
Kang J, Hang L, Zheng W, Luo J, Zhang X, Song Y, Liu A
Molecular medicine reports. 2022; 25(1):

Growth differentiation factor 5: a neurotrophic factor with neuroprotective potential in Parkinson's disease.
Goulding SR, Anantha J, Collins LM, Sullivan AM, O'Keeffe GW
Neural regeneration research. 2022; 17(1): 38-44

New insights into Epstein‑Barr virus‑associated tumors: Exosomes (Review).
Chen W, Xie Y, Wang T, Wang L
Oncology reports. 2022; 47(1):

Visual naked-eye detection of SARS-CoV-2 RNA based on covalent organic framework capsules.
Wang M, Lin Y, Lu J, Sun Z, Deng Y, Wang L, Yi Y, Li J, Yang J, Li G
Chemical engineering journal (Lausanne, Switzerland : 1996). 2022; 429(): 132332

The different activities of RNA G-quadruplex structures are controlled by flanking sequences.
Zheng AJ, Thermou A, Guixens Gallardo P, Malbert-Colas L, Daskalogianni C, Vaudiau N, Brohagen P, Granzhan A, Blondel M, Teulade-Fichou MP, Martins RP, Fahraeus R
Life science alliance. 2022; 5(2):


Full-text options


Latest Statistics about COVID-19
• pubstat.org


Add your Article(s) to Indexes
• citeindex.org






Covid-19 Trends and Statistics
ScopeMed.com
CiteIndex.org
CancerLine
FoodsLine
PhytoMedline
Follow ScopeMed on Twitter
Author Tools
eJPort Journal Hosting
About BiblioMed
License Information
Terms & Conditions
Privacy Policy
Contact Us

The articles in Bibliomed are open access articles licensed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License (https://creativecommons.org/licenses/by-nc-sa/4.0/) which permits unrestricted, non-commercial use, distribution and reproduction in any medium, provided the work is properly cited.
ScopeMed is a Database Service for Scientific Publications. Copyright ScopeMed Information Services.



ScopeMed Web Sites